It has recently become possible to \"weigh\" DNA molecules by measuring the infl
ID: 3899505 • Letter: I
Question
It has recently become possible to "weigh" DNA molecules by measuring the influence of their mass on a nano-oscillator. Figure shows a thin rectangular cantilever etched out of silicon (density 2300 kg/m3) with a small gold dot at the end. If pulled down and released, the end of the cantilever vibrates with simple harmonic motion, moving up and down like a diving board after a jump. When bathed with DNA molecules whose ends have been modified to bind with gold, one or more molecules may attach to the gold dot. The addition of their mass causes a very slight-but measurable-decrease in the oscillation frequency. A vibrating cantilever of mass M can be modeled as a block of mass 13M attached to a spring. (The factor of 13 arises from the moment of inertia of a bar pivoted at one end.) Neither the mass nor the spring constant can be determined very accurately-perhaps to only two significant figures-but the oscillation frequency can be measured with very high precision simply by counting the oscillations. In one experiment, the cantilever was initially vibrating at exactly 14MHz . Attachment of a DNA molecule caused the frequency to decrease by 60Hz .
(Figure 1)
What was the mass of the DNA?
Explanation / Answer
F - k x = 0
(13m) d^2x/dt^2 = k x
d^2x/dt^2 = (k/13m) x = w^2 x
solution is
x = A sin(w t) where w is the angular frequency = 2 pi f
2 pi f = sqrt(3k/m) = (k 13)^(1/2) m^(-(1/2))
so 2 pi df = -(1/2) (k/13)^(1/2) m^(-(3/2)) dm
will give you the mass of the DNA (the change in mass of the
cantilever m). You didn't give the dimension of the cantilever
so I could not compute m for you, but if you know the dimension
just use the density above to calculate m.
Another more accurate way to approach this is to calculate
the change in the moment of intertia from the added molecule,
but the crudeness of the setup would not seem to warrant that.
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