Cell biology help What do you see? What does different color (red/blue/black) co
ID: 79263 • Letter: C
Question
Cell biology help
What do you see? What does different color (red/blue/black) coding of the sequences mean? Does it make any sense to you? Check all the individual protein sequences with the “consensus” sequence (bottom line). What information do you get from this analysis? Can you now relate from this sequence alignment why their predicted biological and molecular functions are also similar?
In addition to the questions listed above, include a short paragraph where you will explain your observations on the protein alignment analysis.
version 5.4.1 1991, 1994 1996 Copyright I N.R.A France 1989 Published research using this software should cite Multiple sequence alignment with hierarchical clustering F. CORPET, 1988 Nucl. Acids Res 16 (22) 10890 Symbol comparison table blosum62 Gap weight: 12 Gap length weight: 2 Consensus levels: high 908 low 508 Consensus symbols: is anyone of IV is anyone of LM is anyone of FY is anyone of NDOEBZ MSF 606 Check: Len 606 Check: 4044 Weight: 0.62 Name Luta 0290 Name: LAEL 147 000006 Len 606 Check: 1715 Weight: 0.52 Name: LARLEM1108 110 Len 606 Check: 2613 Weight: 0.52 Name: TvY 486 1107270 Len 606 Check: 8619 Weight: 20 Name TcSYL 0056400 Len 606 Check 1887 Weight 2.15 Len 606 Check 7556 Weight: 0.00 Name: ConsensusExplanation / Answer
This analysis has been done to check the structural and sequence similarity of these protein. Red colour residues showing the high level of conservation of amino acids between these proteins means these residues are conserve in all these protein. blue colour showing less conservation means these residues are common in most of the protein but in some protein conservation is missing. Black colour is showing no or neutral conservation.
Because these sequence have significant similarity so it is indicating that there nature should also be same.
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